Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904557.1_cds_XP_016454717.1_48714
CDS Infomation

[gene=LOC107778906] [db_xref=GeneID:107778906] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016454717.1] [location=join(83821..84699,85349..85969)] [gbkey=CDS]
Sequence

ATGCAGTTCTTCAACTTCTTTTCCCTTTTCCTTTTTGTGTCTTTCCTCTTTTTATTTAAG
AAATGGAAGAATTCCAGTAGCCAAACCAAAAGATTGCCTCCAGGTCCATGGAAATTACCT
ATTCTTGGAAGCATGCTTCATTTGCTAGGTGGACATCCACATCATGTCCTTAGAGATTTA
GCCAAAAAATATGGACCACTTATGCACCTTCAACTAGGTGAAGTTTCTCTAGTTGTTGTT
ACTTCTCCTGAGATGGCAAAAGAAGTGCTAAAAACTCATGACCTCGCTTTTGCATCTAGG
CCTTTACTTGTAGCTGCCAAGATTGTTTGTTATAATGGGACGGACATTGTCTTTTCTCCC
TATGGAAATTACTGGAGACAGATGCGTAAAATTTGTCTCTTGGAATTGCTCAGTTCCAAA
AGCGTCAAGTCATTCAACTCAATTAGACAAGATGAAGTTCATCGTATGATTGAATTTTTT
CGATCATCTCCTGGTAAGCCGGTTAATGTAACAAAAAGGTTTGCTCTATTCACAAGCTCT
ATGACATGTAGATCAGCCTTTGGACAAGAACACAAGGAGCAAGATGAATTTGTACGACTA
GTCAAAAAAGTGTCAAACTATATGGAAGGGTTTGATGTGGCTGATATATTCCCTTCATTG
AAGTTTCTTCATGTGCTTACTGGAATGAAGGCTAAAGTGATGGATGCACACCATGAATTA
GATGAGATTCTTGAAAATATCATCACTGAGCGCAAGAAGGTTGCAAAGACCAATTGCGAA
TCAAGAGGTGAAGGTATAGTTGATGTACTGCTAAGACTTATGAAGGAAGGAGGCCTCCAA
TTTCCAATCACTAACGACAACATCAAAGCTATTGTCTTTGACATGTTTGCTGCGGGAACA
GAAACTTCATCAACAACAATTAATTGGGCCATGGTCGAAATGATGAAGAAGCCAAGTGTA
TTTGCCAAAGCTCAAGCAGAGGTAAGAAAAATCTTGAGAGGGAAAGAAACTTTTGGTGAA
ATTGATGTCGAGGAGTTCAAATACCTAAAGATGGTTATTAAAGAAACTTTCAGACTCCAC
CCTCCACTACCTCTTTTGATTCCAAGAAAATGTAGAGAAGAAACAGACTTAAACGGCTAC
ACTATTCCATTGAAAACAACAGTCGTAGTTAATGTTTGGGCAATGGGAAGAGATCCAAAA
TATTGGGATGACGTAGAAAGCTTTAAACCTGAGAGATTTGAGAATAACTCGATGGATTAT
ATTGGTAATAATTTTGAATATCTTCCCTTTGGTAGTGGAAGGAGAATTTGCCCTGGAATA
TCATTTGGTTTAGCAAATGTTTATTTTCCACTGGCTCAATTATTGTATCACTTTGACTGG
AAACTCCCAAGTGGAATTAATCCAAGTGCACTTGACTTGACTGAGGCGACTGGAGCAGCT
TGTGCAAGAAAGAATGACCTGCACTTGATCGCTACTCCCTATCAACCTTGTCAAGAGTGA

Peptide Sequence

PEP ID

XP_016454717.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MQFFNFFSLFLFVSFLFLFKKWKNSSSQTKRLPPGPWKLPILGSMLHLLGGHPHHVLRDL
AKKYGPLMHLQLGEVSLVVVTSPEMAKEVLKTHDLAFASRPLLVAAKIVCYNGTDIVFSP
YGNYWRQMRKICLLELLSSKSVKSFNSIRQDEVHRMIEFFRSSPGKPVNVTKRFALFTSS
MTCRSAFGQEHKEQDEFVRLVKKVSNYMEGFDVADIFPSLKFLHVLTGMKAKVMDAHHEL
DEILENIITERKKVAKTNCESRGEGIVDVLLRLMKEGGLQFPITNDNIKAIVFDMFAAGT
ETSSTTINWAMVEMMKKPSVFAKAQAEVRKILRGKETFGEIDVEEFKYLKMVIKETFRLH
PPLPLLIPRKCREETDLNGYTIPLKTTVVVNVWAMGRDPKYWDDVESFKPERFENNSMDY
IGNNFEYLPFGSGRRICPGISFGLANVYFPLAQLLYHFDWKLPSGINPSALDLTEATGAA
CARKNDLHLIATPYQPCQE

Transcript Sequence

Gene sequence data has not been registered.